According to Gabriel, the lyrics could refer to either the love between a man and woman or the relationship between a person and God.
The West African musician Youssou N'Dour sang backup on this track, giving it a distinctive vocal texture. Gabriel learned about him in 1984 when N'Dour was performing in England. They became friends and collaborators, with a mutual respect for each others' music. N'Dour joined Gabriel on the So tour and was very well received - he was part of an extended version of "In Your Eyes" and also sang on "Biko." In 1991 Gabriel performed the song in N'Dour's native country of Senegal before a crowd of 70,000.
This was featured in the 1989 movie Say Anything in a scene where John Cusack plays this from a Boom Box he holds over his head to win the heart of Ione Skye. Cameron Crowe, who directed the film, was going to use Billy Idol's "Got To Be A Lover," but it didn't work with the scene. Crowe got the idea to use this when he played a tape from his wedding which had the song on it. Because it was a deeply personal song, Gabriel did not want to let him use it, but when Crowe called and sent him a tape of the movie, Gabriel loved it and gave his approval.
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